Pepper, the pet cat who made headlines last year for his role in the discovery of the first jeilongvirus found in the U.S., is at it again. This time, his hunting prowess contributed to the identification of a new strain of orthoreovirus.

John Lednicky, Ph.D., Pepper's owner and a University of Florida College of Public Health and Health Professions virologist, took Pepper's catch -- a dead Everglades short-tailed shrew -- into the lab for testing as part of his ongoing work to understand transmission of the mule deerpox virus.

Testing revealed the shrew had a previously unidentified strain of orthoreovirus. Viruses in this genus are known to infect humans, white-tailed deer, bats and other mammals. While orthoreoviruses' effects on humans are not yet well understood, there have been rare reports of the virus being associated with cases of encephalitis, meningitis and gastroenteritis in children.

"The bottom line is we need to pay attention to orthoreoviruses, and know how to rapidly detect them," said Lednicky, a research professor in the PHHP Department of Environmental and Global Health and a member of UF's Emerging Pathogens Institute.

The UF team published the complete genomic coding sequences for the virus they named "Gainesville shrew mammalian orthoreovirus type 3 strain UF-1" in the journal Microbiology Resource Announcements.

"There are many different mammalian orthoreoviruses and not enough is known about this recently identified virus to be concerned," said the paper's lead author Emily DeRuyter, a UF Ph.D. candidate in One Health. "Mammalian orthoreoviruses were originally considered to be 'orphan' viruses, present in mammals including humans, but not associated with diseases. More recently, they have been implicated in respiratory, central nervous system and gastrointestinal diseases."

The Lednicky lab's jeilongvirus and orthoreovirus discoveries come on the heels of the team publishing their discovery of two other novel viruses found in farmed white-tailed deer. Given the propensity of viruses to constantly evolve, paired with the team's sophisticated lab techniques, finding new viruses isn't entirely surprising, Lednicky said.

"I'm not the first one to say this, but essentially, if you look, you'll find, and that's why we keep finding all these new viruses," Lednicky said.

Like influenza virus, two different types of orthoreovirus can infect a host cell, causing the viruses' genes to mix and match, in essence, creating a brand new virus, Lednicky said.

In 2019, Lednicky and colleagues isolated the first orthoreovirus found in a deer. That strain's genes were nearly identical to an orthoreovirus found in farmed mink in China and a deathly ill lion in Japan. How in the world, the scientific community wondered, could the same hybrid virus appear in a farmed deer in Florida and two species of carnivores across the globe? Some experts speculated that components of the animals' feed could have come from the same manufacturer.

With so many unanswered questions about orthoreoviruses and their modes of transmission, prevalence in human and animal hosts and just how sick they could make us, more research is needed, DeRuyter and Lednicky said.

Next steps would include serology and immunology studies to understand the threat Gainesville shrew mammalian orthoreovirus type 3 strain UF-1 may hold for humans, wildlife and pets.

For readers concerned about Pepper's health, rest assured. He has shown no signs of illness from his outdoor adventures and will likely continue to contribute to scientific discovery through specimen collection.

"This was an opportunistic study," Lednicky said. "If you come across a dead animal, why not test it instead of just burying it? There is a lot of information that can be gained."

Read more …Florida cat sniffs out another new virus—and scientists are listening

For decades, the story of Alzheimer's research has been dominated by a battle between A-beta and tau amyloids, both of which can kill neurons and impact the brain's ability to function. A new study suggests, however, that these sticky brain plaques may not be operating alone.

Johns Hopkins University researchers have identified more than 200 types of misfolded proteins in rats that could be associated with age-related cognitive decline.

The findings could lead the way to finding new therapeutic targets and treatments in humans that could provide relief for the millions of people over 65 who suffer from Alzheimer's, dementia, or other diseases that rob them of their memories and independence as they age.

"Amyloids are the buildup of misshapen proteins. They're big and ugly and easy to see under the microscope, so it makes sense that they catch our attention. But we're seeing hundreds of proteins misfolding in ways that don't clump together in an amyloid and yet still seem to impact how the brain functions," said Stephen Fried, an assistant professor of chemistry and protein scientist who studies how molecules in the brain change during aging. "Our research is showing that amyloids are just the tip of the iceberg."

The results were published on July 11 in Science Advances.

To understand the molecular differences between older brains that are mentally sharp and those that are experiencing decline, Fried and his team studied 17 2-year-old rats that grew up in the same colony. Seven rats performed poorly on memory and problem-solving tests and were considered cognitively impaired, while 10 performed as well as 6-month-old rats.

The researchers then measured more than 2,500 types of protein in the hippocampus, the part of the brain associated with spatial learning and memory. For the first time, scientists were able to determine for a large number of proteins whether individual proteins were misshapen or folded incorrectly, allowing the researchers to work out which proteins misfold for all the rats and are associated with aging in general versus which proteins specifically misfold in cognitively impaired rats.

More than 200 proteins were misfolded in the cognitively impaired rats yet maintained their shapes in the cognitively healthy rats. The findings suggest that some of those proteins are contributing to cognitive decline, the researchers said.

Misfolded proteins are unable to carry out tasks necessary for a cell to function properly, so cells have a natural surveillance system that identifies and destroys these misbehaving proteins. Previously, researchers thought misfolded proteins -- specifically A-beta and tau proteins -- were only disruptive when they clumped into amyloids.

"We think there are a lot of proteins that can be misfolded, not form amyloids, and still be problematic," Fried said. "And that suggests these misfolded proteins have ways of escaping this surveillance system in the cell."

But exactly how those misfolded proteins slip past a cell's security system remains a mystery.

Next, the team plans to look at misfolded proteins under high-resolution microscopes to get a more detailed picture of what their deformities look like at the molecular level.

"A lot of us have experienced a loved one or a relative who has become less capable of doing those everyday tasks that require cognitive abilities," Fried said. "Understanding what's physically going on in the brain could lead to better treatments and preventive measures."

Read more …Scientists just found 200+ hidden proteins that may drive Alzheimer’s

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